The Python Oracle

How do I get a list of all the duplicate items using pandas in python?

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Chapters
00:00 Question
01:47 Accepted answer (Score 279)
02:36 Answer 2 (Score 247)
03:09 Answer 3 (Score 232)
03:43 Answer 4 (Score 26)
04:12 Thank you

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Full question
https://stackoverflow.com/questions/1465...

Question links:
[duplicated method]: http://pandas.pydata.org/pandas-docs/dev...

Answer 1 links:
[duplicated]: http://pandas.pydata.org/pandas-docs/sta...

Answer 2 links:
[documentation]: http://pandas.pydata.org/pandas-docs/sta...

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Content licensed under CC BY-SA
https://meta.stackexchange.com/help/lice...

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Tags
#python #pandas #duplicates

#avk47



ACCEPTED ANSWER

Score 303


Method #1: print all rows where the ID is one of the IDs in duplicated:

>>> import pandas as pd
>>> df = pd.read_csv("dup.csv")
>>> ids = df["ID"]
>>> df[ids.isin(ids[ids.duplicated()])].sort_values("ID")
       ID ENROLLMENT_DATE        TRAINER_MANAGING        TRAINER_OPERATOR FIRST_VISIT_DATE
24  11795       27-Feb-12      0643D38-Hanover NH      0643D38-Hanover NH        19-Jun-12
6   11795        3-Jul-12  0649597-White River VT  0649597-White River VT        30-Mar-12
18   8096       19-Dec-11  0649597-White River VT  0649597-White River VT         9-Apr-12
2    8096        8-Aug-12      0643D38-Hanover NH      0643D38-Hanover NH        25-Jun-12
12   A036       30-Nov-11     063B208-Randolph VT     063B208-Randolph VT              NaN
3    A036        1-Apr-12      06CB8CF-Hanover NH      06CB8CF-Hanover NH         9-Aug-12
26   A036       11-Aug-12      06D3206-Hanover NH                     NaN        19-Jun-12

but I couldn't think of a nice way to prevent repeating ids so many times. I prefer method #2: groupby on the ID.

>>> pd.concat(g for _, g in df.groupby("ID") if len(g) > 1)
       ID ENROLLMENT_DATE        TRAINER_MANAGING        TRAINER_OPERATOR FIRST_VISIT_DATE
6   11795        3-Jul-12  0649597-White River VT  0649597-White River VT        30-Mar-12
24  11795       27-Feb-12      0643D38-Hanover NH      0643D38-Hanover NH        19-Jun-12
2    8096        8-Aug-12      0643D38-Hanover NH      0643D38-Hanover NH        25-Jun-12
18   8096       19-Dec-11  0649597-White River VT  0649597-White River VT         9-Apr-12
3    A036        1-Apr-12      06CB8CF-Hanover NH      06CB8CF-Hanover NH         9-Aug-12
12   A036       30-Nov-11     063B208-Randolph VT     063B208-Randolph VT              NaN
26   A036       11-Aug-12      06D3206-Hanover NH                     NaN        19-Jun-12



ANSWER 2

Score 286


With Pandas version 0.17, you can set 'keep = False' in the duplicated function to get all the duplicate items.

In [1]: import pandas as pd

In [2]: df = pd.DataFrame(['a','b','c','d','a','b'])

In [3]: df
Out[3]: 
       0
    0  a
    1  b
    2  c
    3  d
    4  a
    5  b

In [4]: df[df.duplicated(keep=False)]
Out[4]: 
       0
    0  a
    1  b
    4  a
    5  b



ANSWER 3

Score 270


df[df.duplicated(['ID'], keep=False)]

it'll return all duplicated rows back to you.

According to documentation:

keep : {‘first’, ‘last’, False}, default ‘first’

  • 'first' : Mark duplicates as True except for the first occurrence.
  • 'last' : Mark duplicates as True except for the last occurrence.
  • False : Mark all duplicates as True.



ANSWER 4

Score 19


df[df['ID'].duplicated() == True]

This worked for me